strokarn - I have PMed you my e-mail.
Larhleolynx - Replacing the 1N4001 with 5819 would raise the RPM a little, and by little I mean little, like 50-80 RPM perhaps.
If the temperatures are only marginally higher, keep the two 1N4001 and be happy

If you have fans connected to the cooler, the higher temperature might be due to the fans spinning slower at the 10V as opposed to the full 12V and no the pump being less efficient.
That diode must be very big, if it's rated at 6 Amperes. Without it's designation you can't tell what the forward voltage of the diode is, therefore you don't know if it would work here at all.
Edited by wlw wl - 5/14/12 at 12:46pm