2nd frame just completed, about 8 seconds slower than what the avg. TPF shows in HFM, so I guess I can't hope for much more. The first frame on the last three WU have been substantially longer, I'm blaming this on Kraken as this didn't happen when I didn't ran it. No real worries though
This is how the log looks at the beginning of a WU for me, not sure what it's doing:
[18:22:53] Project: 6903 (Run 5, Clone 20, Gen 24)
[18:22:53] Assembly optimizations on if available.
[18:22:53] Entering M.D.
[18:23:00] Mapping NT from 4 to 4
[18:23:04] Completed 0 out of 250000 steps (0%)
[18:27:33] ring M.D.
[18:27:39] Using Gromacs checkpoints
[18:27:41] Mapping NT from 4 to 4
[18:27:45] Resuming from checkpoint
[18:27:47] Verified work/wudata_03.log
[18:27:47] Verified work/wudata_03.trr
[18:27:47] Verified work/wudata_03.xtc
[18:27:47] Verified work/wudata_03.edr
[18:27:49] Completed 135 out of 250000 steps (0%)
The 6900/6901 were 30-60sec slower than what I usually see, IIRC.