No you still get the points in the credits column. Bonus points just aren't being calculated because that's not a bigadv unit. Once you get your 10 SMP WU's and start folding bigadv's it'll include bonus points into the credit column.
I only have 5000 points which I think is low compared to what the credits column has stated. A majority of them work units though, I'd say 7 or so were done on PS3 though.